escape=F kable pdf not compilingknit with `pdflatex --shell-escape myfile.tex`?Finding the current position...
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escape=F kable pdf not compiling
knit with `pdflatex --shell-escape myfile.tex`?Finding the current position on the PDFknitr compiling time with large datasetsTables are not compiling using IEEEtran classTable reference not compiling correctlyDisplay if the variable is NA / not-NATeXStudio not compiling .Rnw properly with “scholar” R packageTable spacing issue converting to PDF via LaTeX with pandocExtra } or forgotton $, Fatal error not compiling big tableLaTeX Table not Compiling
I am trying to include m\textsubscript{2} in a column name using kable. When I change escape=F to allow this to occur the PDF fails to compile.
Code:
library(kableExtra)
kable(table2.1,format="latex",row.names=NA,align="c",escape=T,
col.names=c("Survey","StationID","Latitude (degrees)",
"Latitude (minutes)","Longitude (degrees)","Longitude (minutes)","Scallops (number)","Scallops (lbs)","Scallops (baskets)","Scallop density (m\textsubscript{2})","Nematode Prevalence (%)"),caption="Catch data for the commercial dredge from the VIMS/Industry cooperative surveys completed during May-July 2018. Nematode prevalence (percentage of scallops sampled at a given station infected with nematodes) is also provided for each station.",longtable = T) %>%
kable_styling(font_size=8,position="center",latex_options =c("repeat_header", "hold_position"),repeat_header_text="Table 2 continued",repeat_header_method="replace") %>%
column_spec(3:6,width = "0.50in") %>%
column_spec(7:9,width = "0.49in") %>%
column_spec(10:11,width = "0.65in")
I can get a PDF to compile with the superscript format using the following code using a fake small dataset:
A <- data.frame(round(replicate(11, runif(2)),2))
rownames(A) <- c("Hola\textsubscript{123}", "Hola\textsubscript{234}")
kable(A,
row.names = T,
col.names=c("Survey","StationID","Latitude (degrees)",
"Latitude (minutes)","Longitude (degrees)","Longitude (minutes)","Scallops (number)","Scallops (lbs)","Scallops (baskets)","Scallop density (m\textsuperscript{2})","Nematode Prevalence"),escape = F)%>%
kable_styling(font_size=8,position="center",latex_options =c("repeat_header", "hold_position"),repeat_header_text="Table 2 continued",repeat_header_method="replace") %>%
column_spec(3:6,width = "0.25in") %>%
column_spec(7:9,width = "0.25in") %>%
column_spec(10:11,width = "0.65in")
@
My data table2.1 is generated from R source code. The structure is:
data.frame': 770 obs. of 11 variables:
$ Survey : Factor w/ 3 levels "CAI_II","MAB",..: 2 2 2 2 2 2 2 2 2 2 ...
$ StationID : int 201801001 201801002 201801003 201801004 201801005 201801006 201801007 201801008 201801009 201801010 ...
$ Latitude_degrees : int 36 36 36 36 36 36 36 36 36 36 ...
$ Latitude_minutes : num 31 36.1 36.9 41.1 42.1 ...
$ Longitude_degrees: int 74 74 74 74 74 74 74 74 74 74 ...
$ Longitude_minutes: num 48.9 44.5 46.6 48.8 45.4 ...
$ Scallop_number : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallop_lbs : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallops_baskets : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallop_density : num 0 0 0 0 0 0 0 0 0 0 ...
$ Nematode : num 0 0 0 0 0 0 0 0 0 0
When I try to run the example code I got to work with table2.1, the PDF also fails to compile when escape=F. This leads me to think there is something in table2.1 that is preventing the PDF from compiling, but I'm not sure and looking for advice. I am suing RStudio and pdfLaTex.
tables knitr
edited 14 hours ago
JouleV
4,91111139
asked yesterday
user41509user41509
1233
add a comment |
I am trying to include m\textsubscript{2} in a column name using kable. When I change escape=F to allow this to occur the PDF fails to compile.
Code:
library(kableExtra)
kable(table2.1,format="latex",row.names=NA,align="c",escape=T,
col.names=c("Survey","StationID","Latitude (degrees)",
"Latitude (minutes)","Longitude (degrees)","Longitude (minutes)","Scallops (number)","Scallops (lbs)","Scallops (baskets)","Scallop density (m\textsubscript{2})","Nematode Prevalence (%)"),caption="Catch data for the commercial dredge from the VIMS/Industry cooperative surveys completed during May-July 2018. Nematode prevalence (percentage of scallops sampled at a given station infected with nematodes) is also provided for each station.",longtable = T) %>%
kable_styling(font_size=8,position="center",latex_options =c("repeat_header", "hold_position"),repeat_header_text="Table 2 continued",repeat_header_method="replace") %>%
column_spec(3:6,width = "0.50in") %>%
column_spec(7:9,width = "0.49in") %>%
column_spec(10:11,width = "0.65in")
I can get a PDF to compile with the superscript format using the following code using a fake small dataset:
A <- data.frame(round(replicate(11, runif(2)),2))
rownames(A) <- c("Hola\textsubscript{123}", "Hola\textsubscript{234}")
kable(A,
row.names = T,
col.names=c("Survey","StationID","Latitude (degrees)",
"Latitude (minutes)","Longitude (degrees)","Longitude (minutes)","Scallops (number)","Scallops (lbs)","Scallops (baskets)","Scallop density (m\textsuperscript{2})","Nematode Prevalence"),escape = F)%>%
kable_styling(font_size=8,position="center",latex_options =c("repeat_header", "hold_position"),repeat_header_text="Table 2 continued",repeat_header_method="replace") %>%
column_spec(3:6,width = "0.25in") %>%
column_spec(7:9,width = "0.25in") %>%
column_spec(10:11,width = "0.65in")
@
My data table2.1 is generated from R source code. The structure is:
data.frame': 770 obs. of 11 variables:
$ Survey : Factor w/ 3 levels "CAI_II","MAB",..: 2 2 2 2 2 2 2 2 2 2 ...
$ StationID : int 201801001 201801002 201801003 201801004 201801005 201801006 201801007 201801008 201801009 201801010 ...
$ Latitude_degrees : int 36 36 36 36 36 36 36 36 36 36 ...
$ Latitude_minutes : num 31 36.1 36.9 41.1 42.1 ...
$ Longitude_degrees: int 74 74 74 74 74 74 74 74 74 74 ...
$ Longitude_minutes: num 48.9 44.5 46.6 48.8 45.4 ...
$ Scallop_number : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallop_lbs : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallops_baskets : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallop_density : num 0 0 0 0 0 0 0 0 0 0 ...
$ Nematode : num 0 0 0 0 0 0 0 0 0 0
When I try to run the example code I got to work with table2.1, the PDF also fails to compile when escape=F. This leads me to think there is something in table2.1 that is preventing the PDF from compiling, but I'm not sure and looking for advice. I am suing RStudio and pdfLaTex.
tables knitr
edited 14 hours ago
JouleV
4,91111139
asked yesterday
user41509user41509
1233
add a comment |
I am trying to include m\textsubscript{2} in a column name using kable. When I change escape=F to allow this to occur the PDF fails to compile.
Code:
library(kableExtra)
kable(table2.1,format="latex",row.names=NA,align="c",escape=T,
col.names=c("Survey","StationID","Latitude (degrees)",
"Latitude (minutes)","Longitude (degrees)","Longitude (minutes)","Scallops (number)","Scallops (lbs)","Scallops (baskets)","Scallop density (m\textsubscript{2})","Nematode Prevalence (%)"),caption="Catch data for the commercial dredge from the VIMS/Industry cooperative surveys completed during May-July 2018. Nematode prevalence (percentage of scallops sampled at a given station infected with nematodes) is also provided for each station.",longtable = T) %>%
kable_styling(font_size=8,position="center",latex_options =c("repeat_header", "hold_position"),repeat_header_text="Table 2 continued",repeat_header_method="replace") %>%
column_spec(3:6,width = "0.50in") %>%
column_spec(7:9,width = "0.49in") %>%
column_spec(10:11,width = "0.65in")
I can get a PDF to compile with the superscript format using the following code using a fake small dataset:
A <- data.frame(round(replicate(11, runif(2)),2))
rownames(A) <- c("Hola\textsubscript{123}", "Hola\textsubscript{234}")
kable(A,
row.names = T,
col.names=c("Survey","StationID","Latitude (degrees)",
"Latitude (minutes)","Longitude (degrees)","Longitude (minutes)","Scallops (number)","Scallops (lbs)","Scallops (baskets)","Scallop density (m\textsuperscript{2})","Nematode Prevalence"),escape = F)%>%
kable_styling(font_size=8,position="center",latex_options =c("repeat_header", "hold_position"),repeat_header_text="Table 2 continued",repeat_header_method="replace") %>%
column_spec(3:6,width = "0.25in") %>%
column_spec(7:9,width = "0.25in") %>%
column_spec(10:11,width = "0.65in")
@
My data table2.1 is generated from R source code. The structure is:
data.frame': 770 obs. of 11 variables:
$ Survey : Factor w/ 3 levels "CAI_II","MAB",..: 2 2 2 2 2 2 2 2 2 2 ...
$ StationID : int 201801001 201801002 201801003 201801004 201801005 201801006 201801007 201801008 201801009 201801010 ...
$ Latitude_degrees : int 36 36 36 36 36 36 36 36 36 36 ...
$ Latitude_minutes : num 31 36.1 36.9 41.1 42.1 ...
$ Longitude_degrees: int 74 74 74 74 74 74 74 74 74 74 ...
$ Longitude_minutes: num 48.9 44.5 46.6 48.8 45.4 ...
$ Scallop_number : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallop_lbs : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallops_baskets : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallop_density : num 0 0 0 0 0 0 0 0 0 0 ...
$ Nematode : num 0 0 0 0 0 0 0 0 0 0
When I try to run the example code I got to work with table2.1, the PDF also fails to compile when escape=F. This leads me to think there is something in table2.1 that is preventing the PDF from compiling, but I'm not sure and looking for advice. I am suing RStudio and pdfLaTex.
tables knitr
edited 14 hours ago
JouleV
4,91111139
asked yesterday
user41509user41509
1233
I am trying to include m\textsubscript{2} in a column name using kable. When I change escape=F to allow this to occur the PDF fails to compile.
Code:
library(kableExtra)
kable(table2.1,format="latex",row.names=NA,align="c",escape=T,
col.names=c("Survey","StationID","Latitude (degrees)",
"Latitude (minutes)","Longitude (degrees)","Longitude (minutes)","Scallops (number)","Scallops (lbs)","Scallops (baskets)","Scallop density (m\textsubscript{2})","Nematode Prevalence (%)"),caption="Catch data for the commercial dredge from the VIMS/Industry cooperative surveys completed during May-July 2018. Nematode prevalence (percentage of scallops sampled at a given station infected with nematodes) is also provided for each station.",longtable = T) %>%
kable_styling(font_size=8,position="center",latex_options =c("repeat_header", "hold_position"),repeat_header_text="Table 2 continued",repeat_header_method="replace") %>%
column_spec(3:6,width = "0.50in") %>%
column_spec(7:9,width = "0.49in") %>%
column_spec(10:11,width = "0.65in")
I can get a PDF to compile with the superscript format using the following code using a fake small dataset:
A <- data.frame(round(replicate(11, runif(2)),2))
rownames(A) <- c("Hola\textsubscript{123}", "Hola\textsubscript{234}")
kable(A,
row.names = T,
col.names=c("Survey","StationID","Latitude (degrees)",
"Latitude (minutes)","Longitude (degrees)","Longitude (minutes)","Scallops (number)","Scallops (lbs)","Scallops (baskets)","Scallop density (m\textsuperscript{2})","Nematode Prevalence"),escape = F)%>%
kable_styling(font_size=8,position="center",latex_options =c("repeat_header", "hold_position"),repeat_header_text="Table 2 continued",repeat_header_method="replace") %>%
column_spec(3:6,width = "0.25in") %>%
column_spec(7:9,width = "0.25in") %>%
column_spec(10:11,width = "0.65in")
@
My data table2.1 is generated from R source code. The structure is:
data.frame': 770 obs. of 11 variables:
$ Survey : Factor w/ 3 levels "CAI_II","MAB",..: 2 2 2 2 2 2 2 2 2 2 ...
$ StationID : int 201801001 201801002 201801003 201801004 201801005 201801006 201801007 201801008 201801009 201801010 ...
$ Latitude_degrees : int 36 36 36 36 36 36 36 36 36 36 ...
$ Latitude_minutes : num 31 36.1 36.9 41.1 42.1 ...
$ Longitude_degrees: int 74 74 74 74 74 74 74 74 74 74 ...
$ Longitude_minutes: num 48.9 44.5 46.6 48.8 45.4 ...
$ Scallop_number : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallop_lbs : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallops_baskets : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallop_density : num 0 0 0 0 0 0 0 0 0 0 ...
$ Nematode : num 0 0 0 0 0 0 0 0 0 0
When I try to run the example code I got to work with table2.1, the PDF also fails to compile when escape=F. This leads me to think there is something in table2.1 that is preventing the PDF from compiling, but I'm not sure and looking for advice. I am suing RStudio and pdfLaTex.
tables knitr
tables knitr
edited 14 hours ago
JouleV
4,91111139
asked yesterday
user41509user41509
1233
edited 14 hours ago
JouleV
4,91111139
asked yesterday
user41509user41509
1233
edited 14 hours ago
JouleV
4,91111139
edited 14 hours ago
JouleV
4,91111139
edited 14 hours ago
JouleV
4,91111139
4,91111139
asked yesterday
user41509user41509
1233
asked yesterday
user41509user41509
1233
asked yesterday
user41509user41509
1233
1233
add a comment |
add a comment |
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